Publications

ZORA Publication List

Publications

• Journal Article

  • 2025

    • Shukla, Saurabh; Shalit, Andrey; Hamm, Peter (2025). 2D Raman-THz spectroscopy of imidazolium-based ionic liquids Journal of Chemical Physics, 162(3):034502.

  • 2024

    • Gruber, Christoph; Pupeikis, Justinas; Camenzind, Sandro L; Willenberg, Benjamin; Camargo, Franco V A; Lang, Lukas; Hamm, Peter; Rampur, Anupamaa; Heidt, Alexander; Phillips, Christopher R; Cerullo, Giulio; Keller, Ursula (2024). High-sensitivity pump-probe spectroscopy with a dual-comb laser and a PM-Andi supercontinuum Optics letters, 49(22):6445.
    • Töpfer, Kai; Boittier, Eric; Devereux, Mike; Pasti, Andrea; Hamm, Peter; Meuwly, Markus (2024). Force Fields for Deep Eutectic Mixtures: Application to Structure, Thermodynamics and 2D-Infrared Spectroscopy Journal of Physical Chemistry B, 128(44):10937-10949.
    • Mousavi, Seyyed Jabbar; Biggs, Megan F; Johnson, Jeremy A; Hamm, Peter; Shalit, Andrey (2024). $\chi^{(2)}$-induced artifact overwhelming the third-order signal in 2D Raman–THz spectroscopy of non-centrosymmetric materials Journal of Chemical Physics, 161(13):134502.
    • Oppelt, Kerstin T; Hamm, Peter (2024). FullThrOTTLE-TrIR: Time-Resolved IR Spectroscopy of Electrochemically Generated Species Using a Full Throughput Optically Transparent Thin-Layer Electrochemical Cell Journal of Physical Chemistry C, 128(38):16040-16049.
    • Heckmeier, Philipp J; Ruf, Jeannette; Rochereau, Charlotte; Hamm, Peter (2024). A billion years of evolution manifest in nanosecond protein dynamics Proceedings of the National Academy of Sciences of the United States of America, 121(10):e2318743121.

  • 2023

    • Helbing, Jan; Hamm, Peter (2023). Versatile Femtosecond Laser Synchronization for Multiple-Timescale Transient Infrared Spectroscopy ACS Applied Bio Materials, 127(30):6347-6356.
    • Buhrke, David; Lahav, Yigal; Rao, Aditya; Ruf, Jeannette; Schapiro, Igor; Hamm, Peter (2023). Transient 2D IR Spectroscopy and Multiscale Simulations Reveal Vibrational Couplings in the Cyanobacteriochrome Slr1393-g3 Chemistry, 145(29):15766-15775.
    • Heckmeier, Philipp J; Ruf, Jeannette; Janković, Brankica G; Hamm, Peter (2023). MCL-1 promiscuity and the structural resilience of its binding partners Journal of Chemical Physics, 158(9):095101.
    • Sertcan, Beliz; Mousavi, Seyyed Jabbar; Iannuzzi, Marcella; Hamm, Peter (2023). Low-Frequency Anharmonic Couplings in Crystalline Bromoform: Theory Journal of Chemical Physics, 158(1):014203.

  • 2022

    • Heckmeier, Philipp J; Ruf, Jeannette; Buhrke, David; Janković, Brankica G; Hamm, Peter (2022). Signal Propagation Within the MCL-1/BIM Protein Complex Journal of Molecular Biology, 434(17):167499.
    • Töpfer, Kai; Pasti, Andrea; Das, Anuradha; Salehi, Seyedeh Maryam; Vazquez-Salazar, Luis Itza; Rohrbach, David; Feurer, Thomas; Hamm, Peter; Meuwly, Markus (2022). Structure, Organization, and Heterogeneity of Water-Containing Deep Eutectic Solvents Journal of the American Chemical Society, 144(31):14170-14180.
    • Buhrke, David; Michael, Norbert; Hamm, Peter (2022). Vibrational couplings between protein and cofactor in bacterial phytochrome Agp1 revealed by 2D-IR spectroscopy Proceedings of the National Academy of Sciences of the United States of America, 119(31):e2206400119.
    • Mousavi, Seyyed Jabbar; Berger, Arian; Hamm, Peter; Shalit, Andrey (2022). Low-frequency anharmonic couplings in bromoform revealed from 2D Raman-THz spectroscopy: From the liquid to the crystalline phase Journal of Chemical Physics, 156(17):174501.
    • Bozovic, Olga; Jankovic, Brankica; Hamm, Peter (2022). Using azobenzene photocontrol to set proteins in motion Nature Reviews Chemistry, 6(2):112-124.
    • Salehi, Seyedeh Maryam; Käser, Silvan; Töpfer, Kai; Diamantis, Polydefkis; Pfister, Rolf; Hamm, Peter; Rothlisberger, Ursula; Meuwly, Markus (2022). Hydration dynamics and IR spectroscopy of 4-fluorophenol Physical Chemistry Chemical Physics (PCCP), 24(42):26046-26060.

  • 2021

    • Buhrke, David; Ruf, Jeannette; Heckmeier, Philipp; Hamm, Peter (2021). A stop-flow sample delivery system for transient spectroscopy Review of Scientific Instruments, 92(12):123001.
    • Duchi, Marta; Shukla, Saurabh; Shalit, Andrey; Hamm, Peter (2021). 2D-Raman-THz Spectroscopy with Single-Shot THz Detection Journal of Chemical Physics, 155(17):174201.
    • Jankovic, Brankica; Bozovic, Olga; Hamm, Peter (2021). Intrinsic Dynamics of Protein–Peptide Unbinding Biochemistry, 60(22):1755-1763.
    • Jankovic, Brankica; Ruf, Jeannette; Zanobini, Claudio; Bozovic, Olga; Buhrke, David; Hamm, Peter (2021). Sequence of Events during Peptide Unbinding from RNase S: A Complete Experimental Description Journal of Physical Chemistry Letters, 12(21):5201-5207.
    • Božović, Olga; Ruf, Jeannette; Zanobini, Claudio; Jankovic, Brankica; Buhrke, David; Johnson, Philip J M; Hamm, Peter (2021). The Speed of Allosteric Signaling Within a Single-Domain Protein Journal of Physical Chemistry Letters, 12(17):4262-4267.
    • Oppelt, Kerstin T; Hamm, Peter (2021). About Control: Kinetics in Molecule-based Photochemical Water Reduction Investigated by Transient IR Spectroscopy Chimia, 75(3):188-194.
    • Hamm, Peter (2021). Transient 2D IR spectroscopy from micro- to milliseconds Journal of Chemical Physics, 154(10):104201.
    • Tek, Gökçen; Hamm, Peter (2021). Transient CO desorption from thin Pt films induced by mid-IR pumping Journal of Chemical Physics, 154(8):084706.
    • Shalit, Andrey; Mousavi, Seyyed Jabbar; Hamm, Peter (2021). 2D Raman–THz Spectroscopy of Binary CHBr3–MeOH Solvent Mixture Journal of Physical Chemistry B, 125(2):581-586.
    • Kutus, Bence; Shalit, Andrey; Hamm, Peter; Hunger, Johannes (2021). Dielectric response of light, heavy and heavy-oxygen water: isotope effects on the hydrogen-bonding network's collective relaxation dynamics Physical Chemistry Chemical Physics (PCCP), 23(9):5467-5473.
    • Oppelt, Kerstin T; Sevéry, Laurent; Utters, Mirjam; Tilley, S David; Hamm, Peter (2021). Flexible to rigid: IR spectroscopic investigation of a rhenium-tricarbonyl-complex at a buried interface Physical Chemistry Chemical Physics (PCCP), 23(7):4311-4316.
    • Ruf, Jeannette; Hamm, Peter; Buhrke, David (2021). Needles in a haystack: H-bonding in an optogenetic protein observed with isotope labeling and 2D-IR spectroscopy Physical Chemistry Chemical Physics (PCCP), 23(17):10267-10273.

  • 2020

    • Buhrke, David; Oppelt, Kerstin T; Heckmeier, Philipp J; Fernandez-Teran, Ricardo; Hamm, Peter (2020). Nanosecond protein dynamics in a red/green cyanobacteriochrome revealed by transient IR spectroscopy Journal of Chemical Physics, 153(24):245101.
    • Bozovic, Olga; Jankovic, Brankica; Hamm, Peter (2020). Sensing the allosteric force Nature Communications, 11:5841.
    • Farrell, Kieran M; Ostrander, Josh S; Jones, Andrew C; Yakami, Baichhabi R; Dicke, Sidney S; Middleton, Chris T; Hamm, Peter; Zanni, Martin T (2020). Shot-to-shot 2D IR spectroscopy at 100 kHz using a Yb laser and custom-designed electronics Optics Express, 28(22):33584.
    • Fernández-Terán, Ricardo; Hamm, Peter (2020). A closer look into the distance dependence of vibrational energy transfer on surfaces using 2D IR spectroscopy Journal of Chemical Physics, 153(15):154706.
    • Bozovic, Olga; Zanobini, Claudio; Gulzar, Adnan; Jankovic, Brankica; Buhrke, David; Post, Matthias; Wolf, Steffen; Stock, Gerhard; Hamm, Peter (2020). Real-time observation of ligand-induced allosteric transitions in a PDZ domain Proceedings of the National Academy of Sciences of the United States of America, 117(42):26031-26039.
    • Tek, Gökçen; Hamm, Peter (2020). A Correction Scheme for Fano Line Shapes in Two-Dimensional Infrared Spectroscopy Journal of Physical Chemistry Letters, 11(15):6185-6190.
    • Sidler, David; Hamm, Peter (2020). A Feynman diagram description of the 2D-Raman-THz response of amorphous ice Journal of Chemical Physics, 153(4):044502.
    • Oppelt, Kerstin; Mosberger, Mathias; Ruf, Jeannette; Fernandez-Teran, Ricardo; Probst, Benjamin; Alberto, Roger; Hamm, Peter (2020). Shedding Light on the Molecular Surface Assembly at the Nanoscale Level: Dynamics of a Re(I) Carbonyl Photosensitizer with a Coadsorbed Cobalt Tetrapyridyl Water Reduction Catalyst on ZrO2 Journal of Physical Chemistry C, 124(23):12502-12511.
    • Fernandez-Teran, Ricardo; Ruf, Jeannette; Hamm, Peter (2020). Vibrational Couplings in Hydridocarbonyl Complexes: A 2D-IR Perspective Inorganic Chemistry, 59(11):7721-7726.
    • Weder, Nicola; Probst, Benjamin; Sévery, Laurent; Fernández-Terán, Ricardo J; Beckord, Jan; Blacque, Olivier; Tilley, S David; Hamm, Peter; Osterwalder, Jürg; Alberto, Roger (2020). Mechanistic insights into photocatalysis and over two days of stable H2 generation in electrocatalysis by a molecular cobalt catalyst immobilized on TiO2 Catalysis Science & Technology, 10(8):2549-2560.

  • 2019

    • Oppelt, Kerstin; Fernández-Terán, Ricardo; Pfister, Rolf; Hamm, Peter (2019). Geminate Recombination versus Cage Escape in the Reductive Quenching of a Re(I) Carbonyl Complex on Mesoporous ZrO2 Journal of Physical Chemistry C, 123(32):19952-19961.
    • Hamm, Peter (2019). Velocity echoes in water Journal of Chemical Physics, 151(5):054505.
    • Ciardi, Gustavo; Berger, Arian; Hamm, Peter; Shalit, Andrey (2019). Signatures of Intra- and Intermolecular Vibrational Coupling in Halogenated Liquids Revealed by Two-Dimensional Raman-Terahertz Spectroscopy Journal of Physical Chemistry Letters, 10(15):4463-4468.
    • Jankovic, Brankica; Gulzar, Adnan; Zanobini, Claudio; Bozovic, Olga; Wolf, Steffen; Stock, Gerhard; Hamm, Peter (2019). Photocontrolling Protein–Peptide Interactions: From Minimal Perturbation to Complete Unbinding Journal of the American Chemical Society, 141(27):10702-10710.
    • Wodak, Shoshana J; Paci, Emanuele; Dokholyan, Nikolay V; Berezovsky, Igor N; Horovitz, Amnon; Li, Jing; Hilser, Vincent J; Bahar, Ivet; Karanicolas, John; Stock, Gerhard; Hamm, Peter; Stote, Roland H; Eberhardt, Jerome; Chebaro, Yassmine; Dejaegere, Annick; Cecchini, Marco; Changeux, Jean-Pierre; Bolhuis, Peter G; Vreede, Jocelyne; Faccioli, Pietro; Orioli, Simone; Ravasio, Riccardo; Yan, Le; Brito, Carolina; Wyart, Matthieu; Gkeka, Paraskevi; Rivalta, Ivan; Palermo, Giulia; McCammon, J Andrew; Panecka-Hofman, Joanna; et al (2019). Allostery in Its Many Disguises: From Theory to Applications Structure, 27(4):566-578.
    • Berger, Arian; Ciardi, Gustavo; Sidler, David; Hamm, Peter; Shalit, Andrey (2019). Impact of nuclear quantum effects on the structural inhomogeneity of liquid water Proceedings of the National Academy of Sciences of the United States of America, 116(7):2458-2463.
    • Hamm, Peter; Sidler, David (2019). Feynman Diagram Description of 2D-Raman-THz Spectroscopy Applied to Water Journal of Chemical Physics, 150(4):044202.

  • 2018

    • Zanobini, Claudio; Bozovic, Olga; Jankovic, Brankica; Koziol, Klemens L; Johnson, Philip J M; Hamm, Peter; Gulzar, Adnan; Wolf, Steffen; Stock, Gerhard (2018). Azidohomoalanine: A Minimally Invasive, Versatile, and Sensitive Infrared Label in Proteins To Study Ligand Binding Journal of Physical Chemistry B, 122(44):10118-10125.
    • Sidler, David; Meuwly, Markus; Hamm, Peter (2018). An efficient water force field calibrated against intermolecular THz and Raman spectra Journal of Chemical Physics, 148(24):244504.
    • Ahmed, Saima; Pasti, Andrea; Fernández-Terán, Ricardo J; Ciardi, Gustavo; Shalit, Andrey; Hamm, Peter (2018). Aqueous solvation from the water perspective Journal of Chemical Physics, 148(23):234505.
    • Stock, Gerhard; Hamm, Peter (2018). A non-equilibrium approach to allosteric communication Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 373(1749):20170187.
    • Wellig, Sebastian; Hamm, Peter (2018). Solvation Layer of Antifreeze Proteins Analyzed with a Markov State Model Journal of Physical Chemistry B, 122(49):11014-11022.

Pagination